Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Hspg2Q05793 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.87□□□□□ -0.35
Hspg2Q05793 Gm45328-201ENSMUST00000210942 917 ntBASIC12.87□□□□□ -0.35
Hspg2Q05793 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Hspg2Q05793 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC12.86□□□□□ -0.35
Hspg2Q05793 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Gm26039-201ENSMUST00000158152 144 ntBASIC12.86□□□□□ -0.35
Hspg2Q05793 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.86□□□□□ -0.35
Hspg2Q05793 Gm43438-201ENSMUST00000198133 379 ntBASIC12.86□□□□□ -0.35
Hspg2Q05793 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Hspg2Q05793 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Hspg2Q05793 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.86□□□□□ -0.35
Hspg2Q05793 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.85□□□□□ -0.35
Hspg2Q05793 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.85□□□□□ -0.35
Hspg2Q05793 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
Hspg2Q05793 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC12.85□□□□□ -0.35
Hspg2Q05793 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Gm43231-201ENSMUST00000202960 2258 ntBASIC12.85□□□□□ -0.35
Hspg2Q05793 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.85□□□□□ -0.35
Hspg2Q05793 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Hspg2Q05793 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.84□□□□□ -0.35
Hspg2Q05793 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Gm13401-201ENSMUST00000117074 291 ntBASIC12.84□□□□□ -0.35
Hspg2Q05793 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.84□□□□□ -0.35
Hspg2Q05793 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.84□□□□□ -0.35
Hspg2Q05793 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC12.84□□□□□ -0.35
Hspg2Q05793 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.84□□□□□ -0.35
Hspg2Q05793 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Hspg2Q05793 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Hspg2Q05793 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.84□□□□□ -0.35
Hspg2Q05793 Ighv6-1-201ENSMUST00000193612 343 ntBASIC12.84□□□□□ -0.35
Hspg2Q05793 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC12.84□□□□□ -0.35
Hspg2Q05793 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Hspg2Q05793 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC12.83□□□□□ -0.35
Hspg2Q05793 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hspg2Q05793 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Hspg2Q05793 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Hspg2Q05793 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
Hspg2Q05793 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Hspg2Q05793 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Idnk-204ENSMUST00000226010 1898 ntBASIC12.83□□□□□ -0.36
Hspg2Q05793 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Hspg2Q05793 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC12.83□□□□□ -0.36
Hspg2Q05793 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms