Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcdP82347 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SgcdP82347 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SgcdP82347 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.15■□□□□ 0.18
SgcdP82347 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SgcdP82347 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SgcdP82347 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SgcdP82347 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.14■□□□□ 0.17
SgcdP82347 Gm12441-201ENSMUST00000121806 588 ntBASIC16.14■□□□□ 0.17
SgcdP82347 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.14■□□□□ 0.17
SgcdP82347 Mir5133-201ENSMUST00000174955 77 ntBASIC16.14■□□□□ 0.17
SgcdP82347 Gm8969-201ENSMUST00000199694 526 ntBASIC16.14■□□□□ 0.17
SgcdP82347 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SgcdP82347 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SgcdP82347 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SgcdP82347 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SgcdP82347 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
SgcdP82347 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SgcdP82347 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.13■□□□□ 0.17
SgcdP82347 Dancr-204ENSMUST00000132389 2347 ntBASIC16.13■□□□□ 0.17
SgcdP82347 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
SgcdP82347 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SgcdP82347 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SgcdP82347 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.12■□□□□ 0.17
SgcdP82347 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.12■□□□□ 0.17
SgcdP82347 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SgcdP82347 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC16.12■□□□□ 0.17
SgcdP82347 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SgcdP82347 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SgcdP82347 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.11■□□□□ 0.17
SgcdP82347 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.11■□□□□ 0.17
SgcdP82347 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC16.11■□□□□ 0.17
SgcdP82347 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.11■□□□□ 0.17
SgcdP82347 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.11■□□□□ 0.17
SgcdP82347 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.11■□□□□ 0.17
SgcdP82347 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Tgds-204ENSMUST00000228543 1594 ntBASIC16.11■□□□□ 0.17
SgcdP82347 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SgcdP82347 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SgcdP82347 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SgcdP82347 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcdP82347 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcdP82347 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcdP82347 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcdP82347 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SgcdP82347 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms