Protein–RNA interactions for Protein: P58466

Ctdsp1, Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdsp1P58466 Gm7860-201ENSMUST00000121190 879 ntBASIC13.7□□□□□ -0.22
Ctdsp1P58466 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctdsp1P58466 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctdsp1P58466 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctdsp1P58466 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctdsp1P58466 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Ctdsp1P58466 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Ctdsp1P58466 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctdsp1P58466 Idnk-204ENSMUST00000226010 1898 ntBASIC13.7□□□□□ -0.22
Ctdsp1P58466 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Ctdsp1P58466 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Gm14026-201ENSMUST00000120625 1789 ntBASIC13.69□□□□□ -0.22
Ctdsp1P58466 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Ctdsp1P58466 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.68□□□□□ -0.22
Ctdsp1P58466 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Ctdsp1P58466 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdsp1P58466 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC13.67□□□□□ -0.22
Ctdsp1P58466 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.67□□□□□ -0.22
Ctdsp1P58466 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.67□□□□□ -0.22
Ctdsp1P58466 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.67□□□□□ -0.22
Ctdsp1P58466 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.67□□□□□ -0.22
Ctdsp1P58466 Gm11841-201ENSMUST00000117060 1963 ntBASIC13.67□□□□□ -0.22
Ctdsp1P58466 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.67□□□□□ -0.22
Ctdsp1P58466 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.66□□□□□ -0.22
Ctdsp1P58466 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC13.66□□□□□ -0.22
Ctdsp1P58466 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctdsp1P58466 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms