Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.9■□□□□ 0.78
CDKN2DP55273 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CDKN2DP55273 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKN2DP55273 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKN2DP55273 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.9■□□□□ 0.78
CDKN2DP55273 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.9■□□□□ 0.78
CDKN2DP55273 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDKN2DP55273 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDKN2DP55273 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 MIR935-201ENST00000401179 91 ntBASIC19.89■□□□□ 0.77
CDKN2DP55273 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.89■□□□□ 0.77
CDKN2DP55273 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.89■□□□□ 0.77
CDKN2DP55273 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
CDKN2DP55273 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKN2DP55273 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.89■□□□□ 0.77
CDKN2DP55273 AC125437.2-201ENST00000625180 2167 ntBASIC19.89■□□□□ 0.77
CDKN2DP55273 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDKN2DP55273 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDKN2DP55273 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKN2DP55273 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDKN2DP55273 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKN2DP55273 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDKN2DP55273 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDKN2DP55273 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.88■□□□□ 0.77
CDKN2DP55273 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDKN2DP55273 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.88■□□□□ 0.77
CDKN2DP55273 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.88■□□□□ 0.77
CDKN2DP55273 AC093787.1-201ENST00000450396 207 ntBASIC19.88■□□□□ 0.77
CDKN2DP55273 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
CDKN2DP55273 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.88■□□□□ 0.77
CDKN2DP55273 AC008694.1-202ENST00000636953 945 ntBASIC19.88■□□□□ 0.77
CDKN2DP55273 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CDKN2DP55273 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDKN2DP55273 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDKN2DP55273 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 AC010980.2-201ENST00000587099 1412 ntBASIC19.87■□□□□ 0.77
CDKN2DP55273 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKN2DP55273 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.87■□□□□ 0.77
CDKN2DP55273 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKN2DP55273 AC005181.1-201ENST00000604782 1256 ntBASIC19.87■□□□□ 0.77
CDKN2DP55273 OR10C1-204ENST00000622521 1039 ntBASIC19.87■□□□□ 0.77
CDKN2DP55273 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKN2DP55273 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC19.87■□□□□ 0.77
CDKN2DP55273 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDKN2DP55273 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKN2DP55273 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKN2DP55273 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKN2DP55273 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 METTL26-203ENST00000397664 604 ntTSL 2 BASIC19.86■□□□□ 0.77
CDKN2DP55273 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKN2DP55273 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.86■□□□□ 0.77
CDKN2DP55273 AC080038.1-201ENST00000611274 1154 ntBASIC19.86■□□□□ 0.77
CDKN2DP55273 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CDKN2DP55273 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms