Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Xcl1P47993 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Xcl1P47993 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Xcl1P47993 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Xcl1P47993 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Gm13216-201ENSMUST00000117145 591 ntBASIC11.43□□□□□ -0.58
Xcl1P47993 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Xcl1P47993 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC11.43□□□□□ -0.58
Xcl1P47993 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Xcl1P47993 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Xcl1P47993 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Xcl1P47993 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC11.42□□□□□ -0.58
Xcl1P47993 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC11.42□□□□□ -0.58
Xcl1P47993 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Xcl1P47993 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC11.42□□□□□ -0.58
Xcl1P47993 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC11.41□□□□□ -0.58
Xcl1P47993 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Xcl1P47993 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
Xcl1P47993 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Xcl1P47993 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC11.41□□□□□ -0.58
Xcl1P47993 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC11.41□□□□□ -0.58
Xcl1P47993 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
Xcl1P47993 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
Xcl1P47993 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Xcl1P47993 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.58
Xcl1P47993 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC11.4□□□□□ -0.58
Xcl1P47993 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Xcl1P47993 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Xcl1P47993 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.4□□□□□ -0.58
Xcl1P47993 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Xcl1P47993 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Xcl1P47993 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC11.4□□□□□ -0.58
Xcl1P47993 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Xcl1P47993 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Xcl1P47993 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC11.4□□□□□ -0.59
Xcl1P47993 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Xcl1P47993 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Xcl1P47993 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Xcl1P47993 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms