Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Sox5P35710 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC19.05■□□□□ 0.64
Sox5P35710 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.05■□□□□ 0.64
Sox5P35710 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Sox5P35710 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.05■□□□□ 0.64
Sox5P35710 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Sox5P35710 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sox5P35710 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.04■□□□□ 0.64
Sox5P35710 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Sox5P35710 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Sox5P35710 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.04■□□□□ 0.64
Sox5P35710 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
Sox5P35710 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sox5P35710 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox5P35710 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox5P35710 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox5P35710 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sox5P35710 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox5P35710 Gm11927-201ENSMUST00000118472 759 ntBASIC19.03■□□□□ 0.64
Sox5P35710 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sox5P35710 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC19.03■□□□□ 0.64
Sox5P35710 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.03■□□□□ 0.64
Sox5P35710 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Sox5P35710 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Sox5P35710 Haglr-201ENSMUST00000100000 2085 ntBASIC19.03■□□□□ 0.64
Sox5P35710 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Sox5P35710 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sox5P35710 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Sox5P35710 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox5P35710 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC19.02■□□□□ 0.64
Sox5P35710 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sox5P35710 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Sox5P35710 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.02■□□□□ 0.64
Sox5P35710 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
Sox5P35710 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Sox5P35710 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.02■□□□□ 0.64
Sox5P35710 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox5P35710 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sox5P35710 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox5P35710 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox5P35710 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox5P35710 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox5P35710 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.02■□□□□ 0.64
Sox5P35710 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sox5P35710 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
Sox5P35710 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sox5P35710 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sox5P35710 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sox5P35710 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sox5P35710 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Sox5P35710 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.01■□□□□ 0.63
Sox5P35710 Gm18284-201ENSMUST00000172604 624 ntBASIC19.01■□□□□ 0.63
Sox5P35710 Mtag2-201ENSMUST00000058665 714 ntBASIC19.01■□□□□ 0.63
Sox5P35710 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC19.01■□□□□ 0.63
Sox5P35710 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sox5P35710 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox5P35710 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox5P35710 Gm45412-201ENSMUST00000210217 2275 ntBASIC19■□□□□ 0.63
Sox5P35710 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox5P35710 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19■□□□□ 0.63
Sox5P35710 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Gm42569-201ENSMUST00000200539 472 ntBASIC19■□□□□ 0.63
Sox5P35710 Rab3c-203ENSMUST00000224180 967 ntBASIC19■□□□□ 0.63
Sox5P35710 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Sox5P35710 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sox5P35710 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox5P35710 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sox5P35710 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms