Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.5■□□□□ 0.39
RxrbP28704 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
RxrbP28704 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Gm6420-201ENSMUST00000193885 723 ntBASIC17.5■□□□□ 0.39
RxrbP28704 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RxrbP28704 Gm10033-202ENSMUST00000211874 928 ntBASIC17.5■□□□□ 0.39
RxrbP28704 Gm18671-201ENSMUST00000214826 683 ntBASIC17.5■□□□□ 0.39
RxrbP28704 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.5■□□□□ 0.39
RxrbP28704 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.5■□□□□ 0.39
RxrbP28704 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC17.5■□□□□ 0.39
RxrbP28704 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RxrbP28704 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RxrbP28704 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RxrbP28704 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.49■□□□□ 0.39
RxrbP28704 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RxrbP28704 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC17.49■□□□□ 0.39
RxrbP28704 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RxrbP28704 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RxrbP28704 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC17.48■□□□□ 0.39
RxrbP28704 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.48■□□□□ 0.39
RxrbP28704 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.48■□□□□ 0.39
RxrbP28704 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.48■□□□□ 0.39
RxrbP28704 Gm42642-201ENSMUST00000200683 355 ntBASIC17.48■□□□□ 0.39
RxrbP28704 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.48■□□□□ 0.39
RxrbP28704 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RxrbP28704 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RxrbP28704 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RxrbP28704 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.47■□□□□ 0.39
RxrbP28704 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RxrbP28704 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.46■□□□□ 0.39
RxrbP28704 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.46■□□□□ 0.39
RxrbP28704 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
RxrbP28704 Gm29791-202ENSMUST00000207888 369 ntBASIC17.46■□□□□ 0.39
RxrbP28704 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
RxrbP28704 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
RxrbP28704 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.46■□□□□ 0.39
RxrbP28704 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RxrbP28704 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RxrbP28704 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RxrbP28704 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms