Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.58□□□□□ -0.24
Ccl1P10146 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccl1P10146 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccl1P10146 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccl1P10146 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccl1P10146 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccl1P10146 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Ccl1P10146 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ccl1P10146 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccl1P10146 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Smad6-203ENSMUST00000179458 273 ntBASIC13.57□□□□□ -0.24
Ccl1P10146 Gm38205-201ENSMUST00000192243 258 ntBASIC13.57□□□□□ -0.24
Ccl1P10146 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Ccl1P10146 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccl1P10146 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccl1P10146 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccl1P10146 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccl1P10146 Gm37563-201ENSMUST00000192580 1513 ntBASIC13.56□□□□□ -0.24
Ccl1P10146 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccl1P10146 Gm12251-201ENSMUST00000117893 792 ntBASIC13.56□□□□□ -0.24
Ccl1P10146 Gm12922-201ENSMUST00000120626 809 ntBASIC13.56□□□□□ -0.24
Ccl1P10146 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccl1P10146 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.56□□□□□ -0.24
Ccl1P10146 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccl1P10146 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccl1P10146 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccl1P10146 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Ccl1P10146 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccl1P10146 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC13.55□□□□□ -0.24
Ccl1P10146 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccl1P10146 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC13.55□□□□□ -0.24
Ccl1P10146 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.55□□□□□ -0.24
Ccl1P10146 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 AC093043.1-201ENSMUST00000226700 898 ntBASIC13.55□□□□□ -0.24
Ccl1P10146 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccl1P10146 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Ccl1P10146 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Ccl1P10146 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Ccl1P10146 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms