Protein–RNA interactions for Protein: P02088

Hbb-b1, Hemoglobin subunit beta-1, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hbb-b1P02088 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC12.35□□□□□ -0.43
Hbb-b1P02088 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Hbb-b1P02088 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Hbb-b1P02088 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Hbb-b1P02088 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Hbb-b1P02088 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.33□□□□□ -0.44
Hbb-b1P02088 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Hbb-b1P02088 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Idnk-204ENSMUST00000226010 1898 ntBASIC12.32□□□□□ -0.44
Hbb-b1P02088 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.32□□□□□ -0.44
Hbb-b1P02088 Gm37563-201ENSMUST00000192580 1513 ntBASIC12.32□□□□□ -0.44
Hbb-b1P02088 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hbb-b1P02088 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hbb-b1P02088 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms