Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 AC165080.2-201ENSMUST00000217491 1530 ntBASIC12.77□□□□□ -0.37
TcraP01849 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC12.77□□□□□ -0.37
TcraP01849 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
TcraP01849 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TcraP01849 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.76□□□□□ -0.37
TcraP01849 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.76□□□□□ -0.37
TcraP01849 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TcraP01849 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
TcraP01849 Gm44443-201ENSMUST00000204396 5633 ntBASIC12.76□□□□□ -0.37
TcraP01849 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
TcraP01849 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.75□□□□□ -0.37
TcraP01849 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
TcraP01849 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC12.75□□□□□ -0.37
TcraP01849 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.75□□□□□ -0.37
TcraP01849 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC12.75□□□□□ -0.37
TcraP01849 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC12.75□□□□□ -0.37
TcraP01849 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Wdr70-203ENSMUST00000227371 1130 ntBASIC12.75□□□□□ -0.37
TcraP01849 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TcraP01849 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Gm37374-201ENSMUST00000194954 1829 ntBASIC12.74□□□□□ -0.37
TcraP01849 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.74□□□□□ -0.37
TcraP01849 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Gm27454-201ENSMUST00000185090 204 ntBASIC12.74□□□□□ -0.37
TcraP01849 Flvcr1-202ENSMUST00000191946 1216 ntBASIC12.74□□□□□ -0.37
TcraP01849 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC12.74□□□□□ -0.37
TcraP01849 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC12.74□□□□□ -0.37
TcraP01849 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
TcraP01849 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TcraP01849 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC12.74□□□□□ -0.37
TcraP01849 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TcraP01849 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TcraP01849 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.73□□□□□ -0.37
TcraP01849 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TcraP01849 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.73□□□□□ -0.37
TcraP01849 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.73□□□□□ -0.37
TcraP01849 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC12.73□□□□□ -0.37
TcraP01849 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
TcraP01849 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TcraP01849 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TcraP01849 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
TcraP01849 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TcraP01849 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TcraP01849 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms