Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Slc6a20bO88575 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC19■□□□□ 0.63
Slc6a20bO88575 Gm18733-201ENSMUST00000173950 856 ntBASIC19■□□□□ 0.63
Slc6a20bO88575 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 AC122351.1-201ENSMUST00000220467 126 ntBASIC19■□□□□ 0.63
Slc6a20bO88575 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19■□□□□ 0.63
Slc6a20bO88575 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19■□□□□ 0.63
Slc6a20bO88575 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slc6a20bO88575 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a20bO88575 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Slc6a20bO88575 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a20bO88575 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.99■□□□□ 0.63
Slc6a20bO88575 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a20bO88575 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.99■□□□□ 0.63
Slc6a20bO88575 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Slc6a20bO88575 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a20bO88575 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slc6a20bO88575 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a20bO88575 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
Slc6a20bO88575 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slc6a20bO88575 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Slc6a20bO88575 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 AC154855.1-201ENSMUST00000227353 1458 ntBASIC18.95■□□□□ 0.62
Slc6a20bO88575 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Slc6a20bO88575 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC18.94■□□□□ 0.62
Slc6a20bO88575 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.94■□□□□ 0.62
Slc6a20bO88575 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Slc6a20bO88575 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Slc6a20bO88575 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Slc6a20bO88575 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms