Protein–RNA interactions for Protein: O70404

Vamp8, Vesicle-associated membrane protein 8, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp8O70404 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Vamp8O70404 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
Vamp8O70404 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Vamp8O70404 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Vamp8O70404 Gm10657-201ENSMUST00000193528 1031 ntBASIC12.31□□□□□ -0.44
Vamp8O70404 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Vamp8O70404 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Vamp8O70404 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Vamp8O70404 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.3□□□□□ -0.44
Vamp8O70404 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Vamp8O70404 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Gm14523-201ENSMUST00000117260 558 ntBASIC12.3□□□□□ -0.44
Vamp8O70404 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Vamp8O70404 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC12.3□□□□□ -0.44
Vamp8O70404 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vamp8O70404 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vamp8O70404 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Vamp8O70404 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Vamp8O70404 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Vamp8O70404 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vamp8O70404 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vamp8O70404 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Vamp8O70404 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Vamp8O70404 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Vamp8O70404 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.29□□□□□ -0.44
Vamp8O70404 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Vamp8O70404 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vamp8O70404 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vamp8O70404 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Vamp8O70404 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC12.28□□□□□ -0.44
Vamp8O70404 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Vamp8O70404 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
Vamp8O70404 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Vamp8O70404 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vamp8O70404 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms