Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
Pdlim3O70209 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
Pdlim3O70209 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pdlim3O70209 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pdlim3O70209 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Gm13509-201ENSMUST00000119733 1308 ntBASIC15.81■□□□□ 0.12
Pdlim3O70209 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC15.81■□□□□ 0.12
Pdlim3O70209 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pdlim3O70209 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC15.81■□□□□ 0.12
Pdlim3O70209 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pdlim3O70209 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Gm16401-202ENSMUST00000197463 2074 ntBASIC15.8■□□□□ 0.12
Pdlim3O70209 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdlim3O70209 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.8■□□□□ 0.12
Pdlim3O70209 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Gm38285-201ENSMUST00000192928 922 ntBASIC15.8■□□□□ 0.12
Pdlim3O70209 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.8■□□□□ 0.12
Pdlim3O70209 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.8■□□□□ 0.12
Pdlim3O70209 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Haglr-201ENSMUST00000100000 2085 ntBASIC15.8■□□□□ 0.12
Pdlim3O70209 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Pdlim3O70209 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim3O70209 AC108858.1-201ENSMUST00000228461 1498 ntBASIC15.79■□□□□ 0.12
Pdlim3O70209 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim3O70209 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC15.79■□□□□ 0.12
Pdlim3O70209 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim3O70209 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC15.79■□□□□ 0.12
Pdlim3O70209 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Pdlim3O70209 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Pdlim3O70209 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Pdlim3O70209 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC15.79■□□□□ 0.12
Pdlim3O70209 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Pdlim3O70209 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Pdlim3O70209 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pdlim3O70209 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Pdlim3O70209 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.78■□□□□ 0.12
Pdlim3O70209 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Pdlim3O70209 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Pdlim3O70209 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC15.77■□□□□ 0.12
Pdlim3O70209 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC15.77■□□□□ 0.12
Pdlim3O70209 Gm10418-201ENSMUST00000100943 576 ntBASIC15.77■□□□□ 0.12
Pdlim3O70209 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC15.77■□□□□ 0.12
Pdlim3O70209 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Pdlim3O70209 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Pdlim3O70209 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms