Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl13O55038 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cxcl13O55038 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC14.75□□□□□ -0.05
Cxcl13O55038 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC14.75□□□□□ -0.05
Cxcl13O55038 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.75□□□□□ -0.05
Cxcl13O55038 Gm18101-201ENSMUST00000215769 548 ntBASIC14.75□□□□□ -0.05
Cxcl13O55038 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.75□□□□□ -0.05
Cxcl13O55038 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Cxcl13O55038 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cxcl13O55038 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Cxcl13O55038 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Cxcl13O55038 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.74□□□□□ -0.05
Cxcl13O55038 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Gm22697-201ENSMUST00000175194 63 ntBASIC14.74□□□□□ -0.05
Cxcl13O55038 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.74□□□□□ -0.05
Cxcl13O55038 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.74□□□□□ -0.05
Cxcl13O55038 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cxcl13O55038 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
Cxcl13O55038 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC14.73□□□□□ -0.05
Cxcl13O55038 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.73□□□□□ -0.05
Cxcl13O55038 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Cxcl13O55038 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cxcl13O55038 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Cxcl13O55038 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.73□□□□□ -0.05
Cxcl13O55038 Gm17661-201ENSMUST00000170317 270 ntBASIC14.73□□□□□ -0.05
Cxcl13O55038 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 Gm23634-201ENSMUST00000175071 91 ntBASIC14.73□□□□□ -0.05
Cxcl13O55038 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Cxcl13O55038 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Cxcl13O55038 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cxcl13O55038 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Cxcl13O55038 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl13O55038 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl13O55038 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl13O55038 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.72□□□□□ -0.05
Cxcl13O55038 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl13O55038 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.72□□□□□ -0.05
Cxcl13O55038 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
Cxcl13O55038 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Cxcl13O55038 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl13O55038 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl13O55038 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Cxcl13O55038 Grk6-206ENSMUST00000224995 2971 ntBASIC14.72□□□□□ -0.05
Cxcl13O55038 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl13O55038 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cxcl13O55038 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC14.71□□□□□ -0.05
Cxcl13O55038 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC14.71□□□□□ -0.05
Cxcl13O55038 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cxcl13O55038 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Cxcl13O55038 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms