Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Matn3O35701 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Matn3O35701 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.84■□□□□ 0.13
Matn3O35701 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Matn3O35701 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Matn3O35701 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Matn3O35701 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC15.84■□□□□ 0.13
Matn3O35701 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Matn3O35701 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Matn3O35701 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Matn3O35701 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Matn3O35701 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.83■□□□□ 0.12
Matn3O35701 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Matn3O35701 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Matn3O35701 Gm5874-201ENSMUST00000096101 508 ntBASIC15.83■□□□□ 0.12
Matn3O35701 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC15.83■□□□□ 0.12
Matn3O35701 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Matn3O35701 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Matn3O35701 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Matn3O35701 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.82■□□□□ 0.12
Matn3O35701 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.82■□□□□ 0.12
Matn3O35701 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Smad6-203ENSMUST00000179458 273 ntBASIC15.82■□□□□ 0.12
Matn3O35701 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Matn3O35701 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC15.82■□□□□ 0.12
Matn3O35701 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.82■□□□□ 0.12
Matn3O35701 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Matn3O35701 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Matn3O35701 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.82■□□□□ 0.12
Matn3O35701 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.82■□□□□ 0.12
Matn3O35701 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Matn3O35701 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC15.81■□□□□ 0.12
Matn3O35701 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Matn3O35701 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.81■□□□□ 0.12
Matn3O35701 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Matn3O35701 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC15.81■□□□□ 0.12
Matn3O35701 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Matn3O35701 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Matn3O35701 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms