Protein–RNA interactions for Protein: D3Z235

Gm3543, Predicted gene 3543, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3543D3Z235 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.74■□□□□ 0.11
Gm3543D3Z235 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Gm5898-201ENSMUST00000121016 2071 ntBASIC15.73■□□□□ 0.11
Gm3543D3Z235 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Gm3543D3Z235 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Gm715-201ENSMUST00000117865 831 ntBASIC15.72■□□□□ 0.11
Gm3543D3Z235 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.72■□□□□ 0.11
Gm3543D3Z235 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm3543D3Z235 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Gm3543D3Z235 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Gm42545-201ENSMUST00000202755 922 ntBASIC15.71■□□□□ 0.11
Gm3543D3Z235 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Gm3543D3Z235 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gm3543D3Z235 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
Gm3543D3Z235 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Gm3543D3Z235 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm3543D3Z235 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Gm3543D3Z235 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.71■□□□□ 0.1
Gm3543D3Z235 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Gm12382-201ENSMUST00000122005 922 ntBASIC15.7■□□□□ 0.1
Gm3543D3Z235 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm3543D3Z235 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Gm3543D3Z235 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.69■□□□□ 0.1
Gm3543D3Z235 Ddx41-204ENSMUST00000224765 2199 ntBASIC15.69■□□□□ 0.1
Gm3543D3Z235 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Gm3543D3Z235 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms