Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Pcdhgb8A0A140LI48 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm10653-202ENSMUST00000139570 835 ntBASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Pcdhgb8A0A140LI48 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm8520-201ENSMUST00000186517 868 ntBASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Haglr-201ENSMUST00000100000 2085 ntBASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Pcdhgb8A0A140LI48 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Pcdhgb8A0A140LI48 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Pcdhgb8A0A140LI48 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms