Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Gm37374-201ENSMUST00000194954 1829 ntBASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 Gm29791-202ENSMUST00000207888 369 ntBASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav7-5A0A0G2JFX6 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7-5A0A0G2JFX6 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7-5A0A0G2JFX6 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7-5A0A0G2JFX6 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav7-5A0A0G2JFX6 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Trav7-5A0A0G2JFX6 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 AC166341.7-201ENSMUST00000221698 126 ntBASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Gm43702-201ENSMUST00000198772 2546 ntBASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Gm19439-201ENSMUST00000198195 2273 ntBASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Gm12382-201ENSMUST00000122005 922 ntBASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav7-5A0A0G2JFX6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Trav7-5A0A0G2JFX6 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-5A0A0G2JFX6 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-5A0A0G2JFX6 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-5A0A0G2JFX6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-5A0A0G2JFX6 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Trav7-5A0A0G2JFX6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms