Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC11.91□□□□□ -0.5
Trav4-3A0A0B4J1K1 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Trav4-3A0A0B4J1K1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Trav4-3A0A0B4J1K1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav4-3A0A0B4J1K1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav4-3A0A0B4J1K1 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Trav4-3A0A0B4J1K1 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC11.9□□□□□ -0.51
Trav4-3A0A0B4J1K1 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm11841-201ENSMUST00000117060 1963 ntBASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm26971-201ENSMUST00000182423 1072 ntBASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm9207-201ENSMUST00000198773 1115 ntBASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Trav4-3A0A0B4J1K1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms