Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Zfp783-201ENSMUST00000095946 670 ntBASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav5-4A0A075B652 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Gm12933-201ENSMUST00000120203 872 ntBASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav5-4A0A075B652 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav5-4A0A075B652 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav5-4A0A075B652 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Trav5-4A0A075B652 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav5-4A0A075B652 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms