Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trav4-4-dv10A0A075B651 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gm2399-201ENSMUST00000104944 225 ntBASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav4-4-dv10A0A075B651 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.58□□□□□ -0.23
Trav4-4-dv10A0A075B651 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav4-4-dv10A0A075B651 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav4-4-dv10A0A075B651 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-4-dv10A0A075B651 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-4-dv10A0A075B651 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-4-dv10A0A075B651 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-4-dv10A0A075B651 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-4-dv10A0A075B651 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-4-dv10A0A075B651 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav4-4-dv10A0A075B651 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms