Protein–RNA interactions for Protein: Q9QXA7

Trim44, Tripartite motif-containing protein 44, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim44Q9QXA7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim44Q9QXA7 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim44Q9QXA7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim44Q9QXA7 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim44Q9QXA7 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim44Q9QXA7 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Trim44Q9QXA7 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trim44Q9QXA7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC20.3■□□□□ 0.84
Trim44Q9QXA7 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trim44Q9QXA7 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trim44Q9QXA7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trim44Q9QXA7 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Trim44Q9QXA7 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trim44Q9QXA7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Gm14117-201ENSMUST00000122417 843 ntBASIC20.26■□□□□ 0.83
Trim44Q9QXA7 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trim44Q9QXA7 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trim44Q9QXA7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trim44Q9QXA7 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trim44Q9QXA7 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.23■□□□□ 0.83
Trim44Q9QXA7 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Trim44Q9QXA7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim44Q9QXA7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim44Q9QXA7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim44Q9QXA7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trim44Q9QXA7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
Trim44Q9QXA7 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trim44Q9QXA7 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms