Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Pcdhb3Q91XZ7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Pcdhb3Q91XZ7 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Pcdhb3Q91XZ7 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Gm38205-201ENSMUST00000192243 258 ntBASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Pcdhb3Q91XZ7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Gm10602-201ENSMUST00000098239 609 ntBASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pcdhb3Q91XZ7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Gm13146-201ENSMUST00000118508 780 ntBASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Shroom3-211ENSMUST00000225438 5742 ntBASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Pcdhb3Q91XZ7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pcdhb3Q91XZ7 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pcdhb3Q91XZ7 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms