Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pcdhb4Q91XZ6 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Flg-201ENSMUST00000050758 1488 ntBASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.35■□□□□ 0.37
Pcdhb4Q91XZ6 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pcdhb4Q91XZ6 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Pcdhb4Q91XZ6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Gm37812-201ENSMUST00000195216 2475 ntBASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Pcdhb4Q91XZ6 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Gm5408-201ENSMUST00000197998 747 ntBASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Gm8969-201ENSMUST00000199694 526 ntBASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Pcdhb4Q91XZ6 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.31■□□□□ 0.36
Pcdhb4Q91XZ6 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms