Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.19■□□□□ 0.34
Pcdhga4Q91XY4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Pcdhga4Q91XY4 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdhga4Q91XY4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Gm10698-201ENSMUST00000182663 604 ntBASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhga4Q91XY4 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Mtag2-201ENSMUST00000058665 714 ntBASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhga4Q91XY4 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhga4Q91XY4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhga4Q91XY4 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga4Q91XY4 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Pcdhga4Q91XY4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhga4Q91XY4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms