Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Pcdh18Q8VHR0 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Pcdh18Q8VHR0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh18Q8VHR0 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
Pcdh18Q8VHR0 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pcdh18Q8VHR0 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pcdh18Q8VHR0 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pcdh18Q8VHR0 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Gm18671-201ENSMUST00000214826 683 ntBASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pcdh18Q8VHR0 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms