Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Gm715-201ENSMUST00000117865 831 ntBASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Sf3a1Q8K4Z5 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sf3a1Q8K4Z5 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sf3a1Q8K4Z5 Mir8112-201ENSMUST00000184382 131 ntBASIC21.37■■□□□ 1.01
Sf3a1Q8K4Z5 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sf3a1Q8K4Z5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sf3a1Q8K4Z5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Sf3a1Q8K4Z5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Sf3a1Q8K4Z5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Gm4974-201ENSMUST00000209974 875 ntBASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Sf3a1Q8K4Z5 Gm7712-202ENSMUST00000222331 1510 ntBASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Sf3a1Q8K4Z5 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC21.34■■□□□ 1.01
Sf3a1Q8K4Z5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Sf3a1Q8K4Z5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sf3a1Q8K4Z5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
Sf3a1Q8K4Z5 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.33■■□□□ 1.01
Sf3a1Q8K4Z5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
Sf3a1Q8K4Z5 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sf3a1Q8K4Z5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sf3a1Q8K4Z5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sf3a1Q8K4Z5 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
Sf3a1Q8K4Z5 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Shroom3-211ENSMUST00000225438 5742 ntBASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sf3a1Q8K4Z5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms