Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Zc3h3Q8CHP0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.08■□□□□ 0.33
Zc3h3Q8CHP0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zc3h3Q8CHP0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Zc3h3Q8CHP0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Zc3h3Q8CHP0 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Gm12644-201ENSMUST00000119935 606 ntBASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Gm15372-201ENSMUST00000120729 834 ntBASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Mir5131-201ENSMUST00000175426 93 ntBASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Gm29791-202ENSMUST00000207888 369 ntBASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Gm6376-201ENSMUST00000209407 580 ntBASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Zc3h3Q8CHP0 Gm18688-201ENSMUST00000204695 1859 ntBASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Gm6736-201ENSMUST00000166583 948 ntBASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Gm43575-201ENSMUST00000196420 516 ntBASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Zc3h3Q8CHP0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Gm5264-201ENSMUST00000190584 848 ntBASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Gm5364-201ENSMUST00000216789 889 ntBASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Zc3h3Q8CHP0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Gm7862-201ENSMUST00000121461 292 ntBASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Zc3h3Q8CHP0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Zc3h3Q8CHP0 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Zc3h3Q8CHP0 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zc3h3Q8CHP0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zc3h3Q8CHP0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Zc3h3Q8CHP0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Zc3h3Q8CHP0 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms