Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Skida1Q80YR3 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Skida1Q80YR3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Skida1Q80YR3 Gm43868-201ENSMUST00000205187 2114 ntBASIC17.39■□□□□ 0.38
Skida1Q80YR3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.39■□□□□ 0.38
Skida1Q80YR3 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Skida1Q80YR3 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Gm15847-201ENSMUST00000121417 1065 ntBASIC17.39■□□□□ 0.37
Skida1Q80YR3 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Gm37215-201ENSMUST00000194927 1259 ntBASIC17.39■□□□□ 0.37
Skida1Q80YR3 Gm45701-201ENSMUST00000212049 235 ntBASIC17.39■□□□□ 0.37
Skida1Q80YR3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Skida1Q80YR3 CT025526.1-201ENSMUST00000217327 267 ntBASIC17.39■□□□□ 0.37
Skida1Q80YR3 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC17.39■□□□□ 0.37
Skida1Q80YR3 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Skida1Q80YR3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Mir466f-2-201ENSMUST00000104805 94 ntBASIC17.38■□□□□ 0.37
Skida1Q80YR3 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Tmem243-203ENSMUST00000198935 849 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 AC132384.10-201ENSMUST00000217862 1204 ntBASIC17.38■□□□□ 0.37
Skida1Q80YR3 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
Skida1Q80YR3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Gm13744-201ENSMUST00000118953 850 ntBASIC17.37■□□□□ 0.37
Skida1Q80YR3 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC17.37■□□□□ 0.37
Skida1Q80YR3 AC117797.1-201ENSMUST00000223977 695 ntBASIC17.37■□□□□ 0.37
Skida1Q80YR3 AC154683.1-201ENSMUST00000228409 1284 ntBASIC17.37■□□□□ 0.37
Skida1Q80YR3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Skida1Q80YR3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Klra5-201ENSMUST00000014683 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Gm45276-201ENSMUST00000209549 1086 ntBASIC17.36■□□□□ 0.37
Skida1Q80YR3 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Skida1Q80YR3 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Gm20472-201ENSMUST00000174403 1240 ntBASIC17.35■□□□□ 0.37
Skida1Q80YR3 Gm37845-201ENSMUST00000194977 355 ntBASIC17.35■□□□□ 0.37
Skida1Q80YR3 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.35■□□□□ 0.37
Skida1Q80YR3 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms