Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav3-3Q5R1C3 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav3-3Q5R1C3 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Gm37519-201ENSMUST00000191687 2210 ntBASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Gm10209-201ENSMUST00000203397 1607 ntBASIC13.13□□□□□ -0.31
Trav3-3Q5R1C3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Gm13216-201ENSMUST00000117145 591 ntBASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Gm14117-201ENSMUST00000122417 843 ntBASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav3-3Q5R1C3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Gm5576-201ENSMUST00000075809 1236 ntBASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav3-3Q5R1C3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav3-3Q5R1C3 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms