Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.53□□□□□ -0.08
Trim63Q38HM4 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim63Q38HM4 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trim63Q38HM4 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.52□□□□□ -0.09
Trim63Q38HM4 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trim63Q38HM4 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trim63Q38HM4 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trim63Q38HM4 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trim63Q38HM4 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms