Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
H2afxP27661 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H2afxP27661 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC18.33■□□□□ 0.52
H2afxP27661 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
H2afxP27661 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.33■□□□□ 0.52
H2afxP27661 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.33■□□□□ 0.52
H2afxP27661 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
H2afxP27661 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.33■□□□□ 0.52
H2afxP27661 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
H2afxP27661 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
H2afxP27661 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
H2afxP27661 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC18.33■□□□□ 0.52
H2afxP27661 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.32■□□□□ 0.52
H2afxP27661 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
H2afxP27661 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
H2afxP27661 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H2afxP27661 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Gm22325-201ENSMUST00000158904 308 ntBASIC18.31■□□□□ 0.52
H2afxP27661 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.31■□□□□ 0.52
H2afxP27661 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
H2afxP27661 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
H2afxP27661 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
H2afxP27661 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
H2afxP27661 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
H2afxP27661 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.3■□□□□ 0.52
H2afxP27661 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
H2afxP27661 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.3■□□□□ 0.52
H2afxP27661 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
H2afxP27661 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
H2afxP27661 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
H2afxP27661 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H2afxP27661 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC18.3■□□□□ 0.52
H2afxP27661 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afxP27661 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afxP27661 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H2afxP27661 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC18.29■□□□□ 0.52
H2afxP27661 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afxP27661 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
H2afxP27661 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.29■□□□□ 0.52
H2afxP27661 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.29■□□□□ 0.52
H2afxP27661 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
H2afxP27661 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afxP27661 Gm5576-201ENSMUST00000075809 1236 ntBASIC18.29■□□□□ 0.52
H2afxP27661 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afxP27661 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
H2afxP27661 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H2afxP27661 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
H2afxP27661 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2afxP27661 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.28■□□□□ 0.52
H2afxP27661 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
H2afxP27661 Gm12251-201ENSMUST00000117893 792 ntBASIC18.28■□□□□ 0.52
H2afxP27661 Gm11421-201ENSMUST00000122124 294 ntBASIC18.28■□□□□ 0.52
H2afxP27661 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.28■□□□□ 0.52
H2afxP27661 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afxP27661 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afxP27661 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afxP27661 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H2afxP27661 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afxP27661 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afxP27661 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H2afxP27661 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afxP27661 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afxP27661 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afxP27661 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afxP27661 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.27■□□□□ 0.52
H2afxP27661 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H2afxP27661 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H2afxP27661 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC18.27■□□□□ 0.52
H2afxP27661 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H2afxP27661 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms