Protein–RNA interactions for Protein: P17095

Hmga1, High mobility group protein HMG-I/HMG-Y, mousemouse

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga1P17095 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.9■□□□□ 0.46
Hmga1P17095 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.9■□□□□ 0.46
Hmga1P17095 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Hmga1P17095 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmga1P17095 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Hmga1P17095 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.89■□□□□ 0.46
Hmga1P17095 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmga1P17095 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmga1P17095 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.89■□□□□ 0.45
Hmga1P17095 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Hmga1P17095 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.89■□□□□ 0.45
Hmga1P17095 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Hmga1P17095 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.89■□□□□ 0.45
Hmga1P17095 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.89■□□□□ 0.45
Hmga1P17095 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmga1P17095 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga1P17095 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hmga1P17095 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga1P17095 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
Hmga1P17095 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Hmga1P17095 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga1P17095 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga1P17095 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga1P17095 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.88■□□□□ 0.45
Hmga1P17095 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Hmga1P17095 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmga1P17095 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmga1P17095 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga1P17095 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Hmga1P17095 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga1P17095 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga1P17095 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga1P17095 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga1P17095 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmga1P17095 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmga1P17095 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.86■□□□□ 0.45
Hmga1P17095 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hmga1P17095 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Hmga1P17095 Gm18101-201ENSMUST00000215769 548 ntBASIC17.86■□□□□ 0.45
Hmga1P17095 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.86■□□□□ 0.45
Hmga1P17095 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.86■□□□□ 0.45
Hmga1P17095 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
Hmga1P17095 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmga1P17095 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.85■□□□□ 0.45
Hmga1P17095 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hmga1P17095 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmga1P17095 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmga1P17095 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Hmga1P17095 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.84■□□□□ 0.45
Hmga1P17095 Dmtn-207ENSMUST00000228001 2437 ntBASIC17.84■□□□□ 0.45
Hmga1P17095 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmga1P17095 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC17.83■□□□□ 0.45
Hmga1P17095 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmga1P17095 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga1P17095 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Hmga1P17095 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Hmga1P17095 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga1P17095 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Hmga1P17095 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.83■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms