Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Gm8495-201ENSMUST00000188740 694 ntBASIC20■□□□□ 0.79
Ccdc112A0AUP1 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Ccdc112A0AUP1 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Gm11927-201ENSMUST00000118472 759 ntBASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.99■□□□□ 0.79
Ccdc112A0AUP1 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Mir5133-201ENSMUST00000174955 77 ntBASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Gm7292-201ENSMUST00000194706 2527 ntBASIC19.98■□□□□ 0.79
Ccdc112A0AUP1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Shroom3-211ENSMUST00000225438 5742 ntBASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Ccdc112A0AUP1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ccdc112A0AUP1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Gm27405-201ENSMUST00000184201 112 ntBASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ccdc112A0AUP1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Gm13401-201ENSMUST00000117074 291 ntBASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ccdc112A0AUP1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms