Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gm10655-201ENSMUST00000098658 1397 ntBASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gm43338-201ENSMUST00000198617 2223 ntBASIC12.05□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Idnk-204ENSMUST00000226010 1898 ntBASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 AC099934.2-201ENSMUST00000196389 70 ntBASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 AC156953.1-201ENSMUST00000196953 70 ntBASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 AC157822.2-201ENSMUST00000200291 70 ntBASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.03□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms