Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav13n-2A0A0G2JF93 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm28265-201ENSMUST00000188201 2319 ntBASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Cxcl14-202ENSMUST00000224801 1467 ntBASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Trav13n-2A0A0G2JF93 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 AC107452.1-201ENSMUST00000227963 481 ntBASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13n-2A0A0G2JF93 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13n-2A0A0G2JF93 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gm10167-201ENSMUST00000150411 1479 ntBASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13n-2A0A0G2JF93 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms