Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav9n-2A0A0G2JDP3 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.71□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Dio3-201ENSMUST00000097228 1449 ntBASIC12.71□□□□□ -0.38
Trav9n-2A0A0G2JDP3 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm37820-201ENSMUST00000194021 2147 ntBASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm29257-201ENSMUST00000186115 639 ntBASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm29791-202ENSMUST00000207888 369 ntBASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav9n-2A0A0G2JDP3 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms