Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Gm15546-201ENSMUST00000122095 826 ntBASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav8-1A0A075B641 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav8-1A0A075B641 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav8-1A0A075B641 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav8-1A0A075B641 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav8-1A0A075B641 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Gm5812-201ENSMUST00000061073 957 ntBASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav8-1A0A075B641 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Gm9194-201ENSMUST00000220749 1447 ntBASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav8-1A0A075B641 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav8-1A0A075B641 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms