Protein–RNA interactions for Protein: A0A075B615

Trav4n-4, T cell receptor alpha variable 4D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4A0A075B615 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Gm10209-201ENSMUST00000203397 1607 ntBASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Trav4n-4A0A075B615 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Gm19094-201ENSMUST00000209791 1246 ntBASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC12.15□□□□□ -0.46
Trav4n-4A0A075B615 Gm8839-201ENSMUST00000121279 1645 ntBASIC12.15□□□□□ -0.47
Trav4n-4A0A075B615 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4n-4A0A075B615 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
Trav4n-4A0A075B615 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Gm26917-202ENSMUST00000192833 3329 ntBASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav4n-4A0A075B615 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav4n-4A0A075B615 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms