Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 LEAP2-201ENST00000296877 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 ZFP2-205ENST00000523286 2154 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC010680.2-201ENST00000603521 2117 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 SAXO1-203ENST00000542071 1923 ntAPPRIS ALT2 TSL 3 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 EPB41L5-202ENST00000331393 1777 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 C14orf2-203ENST00000553430 1659 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 DNAJC5G-203ENST00000404433 1647 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AIM2-202ENST00000368130 1529 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 INTS4-211ENST00000535943 1382 ntTSL 5 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 POLR2K-201ENST00000353107 998 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 GAGE2A-201ENST00000362097 528 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 GCG-201ENST00000375497 799 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 SLC25A5P7-201ENST00000406156 896 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 AL136968.2-201ENST00000407959 354 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 LINC00316-201ENST00000416722 455 ntTSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 LINC00426-202ENST00000417079 1045 ntTSL 3 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 RPS27P12-201ENST00000464146 258 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC100843.1-201ENST00000475372 550 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC009269.1-203ENST00000496414 828 ntTSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 HNRNPA1P17-201ENST00000496620 924 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 CASC8-201ENST00000501396 930 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AL133330.1-201ENST00000510619 704 ntTSL 5 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC106774.1-201ENST00000515105 321 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 TCEA1-204ENST00000518784 586 ntTSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AF279873.3-201ENST00000523063 766 ntTSL 3 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC109466.1-203ENST00000524297 1083 ntTSL 3 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 FABP5P7-201ENST00000524732 405 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 SLC22A10-203ENST00000526800 699 ntTSL 5 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 NOVA1-209ENST00000547619 947 ntTSL 3 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 PSMA3-AS1-210ENST00000556002 1039 ntTSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC116903.1-201ENST00000557683 539 ntTSL 4 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC120498.4-201ENST00000561649 320 ntTSL 3 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 HLA-P-207ENST00000568192 747 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC009121.2-201ENST00000572913 714 ntTSL 3 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC018521.4-201ENST00000578239 531 ntTSL 4 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AP001269.1-201ENST00000592820 528 ntTSL 4 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC005197.1-201ENST00000597769 683 ntTSL 5 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AC073534.1-201ENST00000598671 1056 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 CACNB2-214ENST00000612743 597 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 AL109620.1-201ENST00000618738 1197 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 MIR3191-201ENST00000636300 76 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 BTRC-204ENST00000408038 5982 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 NFAT5-208ENST00000566899 4914 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 HYDIN2-203ENST00000614586 13885 ntBASIC7.39□□□□□ -1.23
SNX18Q96RF0 INTS7-202ENST00000366993 3422 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 NEDD4L-207ENST00000435432 3417 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 RAI14-205ENST00000503673 3339 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
SNX18Q96RF0 DGKB-205ENST00000406247 3257 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNX18Q96RF0 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 MAPK10-345ENST00000641724 2980 ntAPPRIS P2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 USP9YP3-201ENST00000434481 1766 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 TFG-204ENST00000476228 1783 ntAPPRIS ALT1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 GOSR2-232ENST00000640051 3964 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 FAM107B-201ENST00000181796 3785 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 PART1-203ENST00000515734 2569 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 CACNB4-239ENST00000636947 5575 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 EEF1A1P10-201ENST00000475365 1390 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC097662.1-204ENST00000396588 2214 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 MYL6-201ENST00000293422 664 ntAPPRIS ALT1 TSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNX18Q96RF0 MIR548XHG-201ENST00000355189 673 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 RNA5SP250-201ENST00000362534 119 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 CENPW-202ENST00000368326 443 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AL032822.1-201ENST00000405827 1063 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 EEF1A1P31-201ENST00000415978 1131 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC006455.6-201ENST00000426192 893 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 LINC02088-201ENST00000428134 620 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 RNF212B-203ENST00000430154 903 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 TBL1YP1-201ENST00000440297 1026 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 AL080317.1-201ENST00000444259 557 ntTSL 2 BASIC7.38□□□□□ -1.23
SNX18Q96RF0 RBMY2AP-201ENST00000445405 1157 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 RBMY2CP-201ENST00000448575 1157 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 RBMY2DP-202ENST00000448881 1157 ntBASIC7.38□□□□□ -1.23
SNX18Q96RF0 AL365436.1-201ENST00000452587 495 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms