Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gtsf1-202ENSMUST00000123724 747 ntTSL 5 BASIC4.28□□□□□ -1.72
Scn1bP97952 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm11714-201ENSMUST00000136927 876 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm16331-201ENSMUST00000144274 498 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm24295-201ENSMUST00000158298 131 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Ear-ps9-201ENSMUST00000161963 460 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Vmn1r163-201ENSMUST00000164537 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Vmn1r135-201ENSMUST00000170931 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Mir3097-201ENSMUST00000175356 67 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Trav6-5-202ENSMUST00000183488 335 ntAPPRIS ALT2 BASIC4.28□□□□□ -1.72
Scn1bP97952 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.28□□□□□ -1.72
Scn1bP97952 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 9130024F11Rik-203ENSMUST00000187858 447 ntTSL 2 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm29524-201ENSMUST00000190819 699 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Gm19231-201ENSMUST00000193212 830 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Gm42459-201ENSMUST00000199679 742 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Gm43897-201ENSMUST00000204019 309 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm30676-201ENSMUST00000214000 1165 ntTSL 5 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm18585-201ENSMUST00000215197 556 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Gm31698-203ENSMUST00000217115 690 ntTSL 5 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 AC114572.1-201ENSMUST00000227262 300 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm23447-201ENSMUST00000082798 163 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Hormad1-204ENSMUST00000171191 1437 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.28□□□□□ -1.72
Scn1bP97952 Sult6b1-204ENSMUST00000169544 2060 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
Scn1bP97952 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Scn1bP97952 Gm7269-201ENSMUST00000210819 1373 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1bP97952 Olfr843-202ENSMUST00000214019 7499 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn1bP97952 Olfr1535-202ENSMUST00000217519 3959 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Scn1bP97952 AC154552.6-201ENSMUST00000221365 1342 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
Scn1bP97952 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1bP97952 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.27□□□□□ -1.73
Scn1bP97952 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Trav8-1-201ENSMUST00000103643 328 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Olfr1165-ps-201ENSMUST00000117860 950 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm12090-201ENSMUST00000118692 758 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm11623-201ENSMUST00000120176 1225 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm12881-201ENSMUST00000121191 203 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm15227-201ENSMUST00000121844 399 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1bP97952 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.27□□□□□ -1.73
Scn1bP97952 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC4.27□□□□□ -1.73
Scn1bP97952 Gm3008-201ENSMUST00000160566 571 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm17038-201ENSMUST00000166586 494 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm25942-201ENSMUST00000180080 110 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1bP97952 Cox6b2-202ENSMUST00000182048 465 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1bP97952 Mir6400-201ENSMUST00000184870 92 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm29031-201ENSMUST00000185316 614 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm29000-201ENSMUST00000185444 614 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm28204-201ENSMUST00000185934 614 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm28290-201ENSMUST00000186505 614 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm28161-201ENSMUST00000186669 614 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm28749-209ENSMUST00000189599 614 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm37421-201ENSMUST00000193088 132 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.27□□□□□ -1.73
Scn1bP97952 Gm33163-201ENSMUST00000194504 614 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Igkv15-101-201ENSMUST00000195917 299 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 Gm43554-201ENSMUST00000199987 186 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm44404-201ENSMUST00000203979 636 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm7407-201ENSMUST00000208301 568 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Scn1bP97952 Gm45690-201ENSMUST00000210775 246 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Gm39197-201ENSMUST00000212069 457 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.27□□□□□ -1.73
Scn1bP97952 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Scn1bP97952 AC161269.1-201ENSMUST00000228426 318 ntBASIC4.27□□□□□ -1.73
Scn1bP97952 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms