Protein–RNA interactions for Protein: Q9JI43

Rhox4b, Homeobox protein EHOX, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhox4bQ9JI43 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Rhox4bQ9JI43 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Spcs1-204ENSMUST00000226782 949 ntBASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Rhox4bQ9JI43 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Gm7160-202ENSMUST00000188519 1027 ntBASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Golgb1-201ENSMUST00000023534 498 ntBASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.17□□□□□ -0.14
Rhox4bQ9JI43 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Gm9207-201ENSMUST00000198773 1115 ntBASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Rhox4bQ9JI43 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4bQ9JI43 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC14.15□□□□□ -0.14
Rhox4bQ9JI43 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4bQ9JI43 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4bQ9JI43 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4bQ9JI43 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Rhox4bQ9JI43 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Rhox4bQ9JI43 Tgds-204ENSMUST00000228543 1594 ntBASIC14.15□□□□□ -0.14
Rhox4bQ9JI43 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms