Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q9CR55 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Gm43598-201ENSMUST00000202482 2479 ntBASIC16.28■□□□□ 0.2
Q9CR55 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Q9CR55 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC16.28■□□□□ 0.2
Q9CR55 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.28■□□□□ 0.2
Q9CR55 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Q9CR55 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.28■□□□□ 0.2
Q9CR55 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q9CR55 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.28■□□□□ 0.2
Q9CR55 Gm45906-201ENSMUST00000208911 1430 ntBASIC16.28■□□□□ 0.2
Q9CR55 Gm32699-201ENSMUST00000221728 1988 ntBASIC16.27■□□□□ 0.2
Q9CR55 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q9CR55 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Q9CR55 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q9CR55 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q9CR55 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q9CR55 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q9CR55 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q9CR55 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Q9CR55 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Q9CR55 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.27■□□□□ 0.2
Q9CR55 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q9CR55 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q9CR55 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Q9CR55 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.27■□□□□ 0.2
Q9CR55 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.27■□□□□ 0.2
Q9CR55 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q9CR55 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.19
Q9CR55 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Q9CR55 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.27■□□□□ 0.19
Q9CR55 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q9CR55 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q9CR55 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q9CR55 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.27■□□□□ 0.19
Q9CR55 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.27■□□□□ 0.19
Q9CR55 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC16.26■□□□□ 0.19
Q9CR55 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC16.26■□□□□ 0.19
Q9CR55 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC16.26■□□□□ 0.19
Q9CR55 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Q9CR55 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Q9CR55 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Q9CR55 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.26■□□□□ 0.19
Q9CR55 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q9CR55 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Q9CR55 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q9CR55 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms