Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Trim33Q99PP7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Gm5643-201ENSMUST00000117081 966 ntBASIC17.35■□□□□ 0.37
Trim33Q99PP7 Gm15375-201ENSMUST00000119510 849 ntBASIC17.35■□□□□ 0.37
Trim33Q99PP7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.35■□□□□ 0.37
Trim33Q99PP7 Mir2861-201ENSMUST00000175539 82 ntBASIC17.35■□□□□ 0.37
Trim33Q99PP7 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.35■□□□□ 0.37
Trim33Q99PP7 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Nrn1-203ENSMUST00000223611 1443 ntBASIC17.35■□□□□ 0.37
Trim33Q99PP7 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Gm37374-201ENSMUST00000194954 1829 ntBASIC17.35■□□□□ 0.37
Trim33Q99PP7 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Trim33Q99PP7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.34■□□□□ 0.37
Trim33Q99PP7 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.34■□□□□ 0.37
Trim33Q99PP7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC17.34■□□□□ 0.37
Trim33Q99PP7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim33Q99PP7 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim33Q99PP7 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim33Q99PP7 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim33Q99PP7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim33Q99PP7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim33Q99PP7 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim33Q99PP7 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.33■□□□□ 0.37
Trim33Q99PP7 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim33Q99PP7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trim33Q99PP7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Trim33Q99PP7 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.33■□□□□ 0.37
Trim33Q99PP7 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Mir6349-201ENSMUST00000184059 97 ntBASIC17.33■□□□□ 0.36
Trim33Q99PP7 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim33Q99PP7 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.32■□□□□ 0.36
Trim33Q99PP7 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.32■□□□□ 0.36
Trim33Q99PP7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Trim33Q99PP7 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Gm8520-201ENSMUST00000186517 868 ntBASIC17.31■□□□□ 0.36
Trim33Q99PP7 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim33Q99PP7 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim33Q99PP7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms