Protein–RNA interactions for Protein: Q91V04

Tram1, Translocating chain-associated membrane protein 1, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tram1Q91V04 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.12■□□□□ 0.01
Tram1Q91V04 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Tram1Q91V04 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.12■□□□□ 0.01
Tram1Q91V04 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Tram1Q91V04 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Tram1Q91V04 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Tram1Q91V04 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Tram1Q91V04 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Tram1Q91V04 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Mir7075-201ENSMUST00000184187 82 ntBASIC15.1■□□□□ 0.01
Tram1Q91V04 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Tram1Q91V04 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC15.1■□□□□ 0.01
Tram1Q91V04 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.1■□□□□ 0.01
Tram1Q91V04 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Tram1Q91V04 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC15.1■□□□□ 0.01
Tram1Q91V04 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Tram1Q91V04 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Tram1Q91V04 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Tram1Q91V04 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC15.09■□□□□ 0.01
Tram1Q91V04 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
Tram1Q91V04 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC15.09■□□□□ 0.01
Tram1Q91V04 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Tram1Q91V04 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Tram1Q91V04 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Tram1Q91V04 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Tram1Q91V04 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tram1Q91V04 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Tram1Q91V04 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC15.08■□□□□ 0
Tram1Q91V04 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.08■□□□□ 0
Tram1Q91V04 Gm8493-201ENSMUST00000196881 489 ntBASIC15.08■□□□□ 0
Tram1Q91V04 Gm43173-201ENSMUST00000202246 593 ntBASIC15.08■□□□□ 0
Tram1Q91V04 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.08■□□□□ 0
Tram1Q91V04 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Tram1Q91V04 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tram1Q91V04 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15.08■□□□□ 0
Tram1Q91V04 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Tram1Q91V04 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC15.08■□□□□ 0
Tram1Q91V04 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Tram1Q91V04 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
Tram1Q91V04 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC15.07■□□□□ 0
Tram1Q91V04 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.07■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms