Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Lsm1Q8VC85 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Lsm1Q8VC85 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 AC122769.4-201ENSMUST00000228166 901 ntBASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Lsm1Q8VC85 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Gm13401-201ENSMUST00000117074 291 ntBASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Mtag2-201ENSMUST00000058665 714 ntBASIC16.79■□□□□ 0.28
Lsm1Q8VC85 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Lsm1Q8VC85 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.78■□□□□ 0.28
Lsm1Q8VC85 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Gm12933-201ENSMUST00000120203 872 ntBASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Gm37179-201ENSMUST00000194862 823 ntBASIC16.77■□□□□ 0.28
Lsm1Q8VC85 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Lsm1Q8VC85 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
Lsm1Q8VC85 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms