Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Scn3bQ8BHK2 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Scn3bQ8BHK2 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Gm43173-201ENSMUST00000202246 593 ntBASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Scn3bQ8BHK2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Scn3bQ8BHK2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Scn3bQ8BHK2 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Scn3bQ8BHK2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Gm44544-201ENSMUST00000207052 1844 ntBASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Scn3bQ8BHK2 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scn3bQ8BHK2 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scn3bQ8BHK2 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms