Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Zc3hc1Q80YV2 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Zc3hc1Q80YV2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Gm42778-201ENSMUST00000199644 553 ntBASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Zc3hc1Q80YV2 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Zc3hc1Q80YV2 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC16.02■□□□□ 0.16
Zc3hc1Q80YV2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Zc3hc1Q80YV2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Zc3hc1Q80YV2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Zc3hc1Q80YV2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Zc3hc1Q80YV2 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Zc3hc1Q80YV2 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Zc3hc1Q80YV2 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Zc3hc1Q80YV2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms