Protein–RNA interactions for Protein: Q62280

Ss18, Protein SSXT, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ss18Q62280 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC12.98□□□□□ -0.33
Ss18Q62280 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 Ap3s1-204ENSMUST00000225520 957 ntBASIC12.98□□□□□ -0.33
Ss18Q62280 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Ss18Q62280 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC12.98□□□□□ -0.33
Ss18Q62280 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.98□□□□□ -0.33
Ss18Q62280 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ss18Q62280 Gm7292-201ENSMUST00000194706 2527 ntBASIC12.98□□□□□ -0.33
Ss18Q62280 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ss18Q62280 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC12.97□□□□□ -0.33
Ss18Q62280 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ss18Q62280 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.97□□□□□ -0.33
Ss18Q62280 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Ss18Q62280 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC12.97□□□□□ -0.33
Ss18Q62280 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.97□□□□□ -0.33
Ss18Q62280 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC12.97□□□□□ -0.33
Ss18Q62280 Gm22325-201ENSMUST00000158904 308 ntBASIC12.97□□□□□ -0.33
Ss18Q62280 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC12.97□□□□□ -0.33
Ss18Q62280 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC12.97□□□□□ -0.33
Ss18Q62280 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC12.97□□□□□ -0.33
Ss18Q62280 Gm42642-201ENSMUST00000200683 355 ntBASIC12.97□□□□□ -0.33
Ss18Q62280 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC12.97□□□□□ -0.33
Ss18Q62280 Gm5874-201ENSMUST00000096101 508 ntBASIC12.97□□□□□ -0.33
Ss18Q62280 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ss18Q62280 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ss18Q62280 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ss18Q62280 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ss18Q62280 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC12.96□□□□□ -0.33
Ss18Q62280 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ss18Q62280 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Ss18Q62280 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ss18Q62280 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ss18Q62280 Gm8495-201ENSMUST00000188740 694 ntBASIC12.96□□□□□ -0.33
Ss18Q62280 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.96□□□□□ -0.33
Ss18Q62280 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.33
Ss18Q62280 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC12.96□□□□□ -0.33
Ss18Q62280 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ss18Q62280 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ss18Q62280 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ss18Q62280 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ss18Q62280 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.96□□□□□ -0.34
Ss18Q62280 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Ss18Q62280 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ss18Q62280 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ss18Q62280 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Ss18Q62280 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Ss18Q62280 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Ss18Q62280 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ss18Q62280 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC12.95□□□□□ -0.34
Ss18Q62280 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Ss18Q62280 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC12.94□□□□□ -0.34
Ss18Q62280 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Ss18Q62280 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC12.94□□□□□ -0.34
Ss18Q62280 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Ss18Q62280 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Ss18Q62280 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Ss18Q62280 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms