Protein–RNA interactions for Protein: Q61221

Hif1a, Hypoxia-inducible factor 1-alpha, mousemouse

Known RBP Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hif1aQ61221 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC17.72■□□□□ 0.43
Hif1aQ61221 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Hif1aQ61221 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Hif1aQ61221 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hif1aQ61221 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Hif1aQ61221 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hif1aQ61221 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC17.71■□□□□ 0.43
Hif1aQ61221 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.71■□□□□ 0.43
Hif1aQ61221 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Hif1aQ61221 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Hif1aQ61221 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.71■□□□□ 0.43
Hif1aQ61221 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hif1aQ61221 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Hif1aQ61221 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Hif1aQ61221 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.7■□□□□ 0.42
Hif1aQ61221 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.7■□□□□ 0.42
Hif1aQ61221 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Hif1aQ61221 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.7■□□□□ 0.42
Hif1aQ61221 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.7■□□□□ 0.42
Hif1aQ61221 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.7■□□□□ 0.42
Hif1aQ61221 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Hif1aQ61221 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Hif1aQ61221 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Hif1aQ61221 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
Hif1aQ61221 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Hif1aQ61221 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Hif1aQ61221 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
Hif1aQ61221 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hif1aQ61221 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.68■□□□□ 0.42
Hif1aQ61221 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Hif1aQ61221 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.67■□□□□ 0.42
Hif1aQ61221 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hif1aQ61221 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hif1aQ61221 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hif1aQ61221 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Hif1aQ61221 Gm15039-201ENSMUST00000118914 875 ntBASIC17.67■□□□□ 0.42
Hif1aQ61221 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 Gm8495-201ENSMUST00000188740 694 ntBASIC17.67■□□□□ 0.42
Hif1aQ61221 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hif1aQ61221 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Hif1aQ61221 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hif1aQ61221 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms